| name | image | Average flow (m³/s) | basin (m²) | Height (m) | origin location | mouth location | Length (m) | latitude (°) | longitude (°) | canyon | Map |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Bad River (South Dakota) | Missouri River | 177,000 | 44.3544000000 | -100.3680000000 | Map | ||||||
| Vermillion River (South Dakota) |  | Missouri River | 154,000 | 42.7311000000 | -96.8906000000 | Map | |||||
| Mosquito Creek (Iowa) |  | Missouri River | 41.1760000000 | -95.8402000000 | Map | ||||||
| Perry Creek (Missouri River tributary) | Missouri River | 42.5000000000 | -96.4090000000 | Map | |||||||
| Little Sioux River | Missouri River | 415,000 | 41.8030000000 | -96.0660000000 | Map |